The minister said he accepted all 32 recommendations made by Professor Troop's pseudomonas review team.
Pat Troop was questioned by the health committee about her review of the pseudomonas outbreak.
Pseudomonas is a tough strain of bacteria that is found widely in soil and stagnant water.
Big hospitals are breeding grounds for drug-resistant staph, pseudomonas and C. diff bacteria.
Pseudomonas bacteria like those which killed four babies have been traced to water taps in neo-natal units.
Nabi scientists chemically synthesized nicotine molecules and stuck them onto the Pseudomonas protein.
The new bacterium is a member of the Pseudomonas Tolaasi subgroup of organisms.
Fattom's solution was to link the sugars to a larger carrier protein, in this case an inactivated bacteria called Pseudomonas.
One comes from a bug called Clostridium propionicum, another from a species of Pseudomonas, and two more from Cupriavidus necator.
The bacteria they tested against, pseudomonas aeruginosa, is commonly found in hospitals.
Caolan Burke was born at Altnagelvin Hospital in County Londonderry in December 2011 but died there ten days later after contracting pseudomonas.
He also highlighted, "the risk of pseudomonas infection and the consequences for any clinical area where there are immunocompromised or debilitated areas".
He said part of the problem was that people in Northern Ireland and elsewhere were not taking pseudomonas as seriously as they should have been.
BBC: Poots meets Belfast Trust heads over pseudomonas review
They infected mice with two bacteria that are both common in lung infections - Pseudomonas aeruginosa and Staphylococcus aureus - and sampled their breath after 24 hours.
The Belfast Trust was also criticised over its handling of the pseudomonas outbreak in January, which claimed the lives of three babies at the Royal Jubilee Maternity's neonatal unit.
Committee chairwoman Sue Ramsey of Sinn Fein was concerned that a circular concerning pseudomonas, issued to health trusts on 23 December 2012, had not stated that a baby had died in Altnagelvin.
"The recommendations of this review will have a significant and beneficial impact on the care provided to babies in neonatal units throughout all our hospitals well into the future and will hopefully provide some comfort to those families that suffered a loss as a result of pseudomonas aerations infection, " Dr Kilgallen said.
BBC: Poots meets Belfast Trust heads over pseudomonas review
"That is one of the recommendations of the report that we have pseudomonas put into the same category as MRSA and C Diff as an alert organism which as soon as you find it the bells ring and you surge into action and I'm sure that is what will happen in the future, " he added.
BBC: Poots meets Belfast Trust heads over pseudomonas review
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