Andrew Strauss, vying for a place in the side with Shah, was out hit wicket to Mark Gillespie for only four.
The former pupil of Pontarddulais Comprehensive School provided a third catch for wicket-keeper Mark Wallace by finding the edge of Will Rudge's bat for his seventh wicket.
Sanath Jayasuriya top-scored for the hosts with 74 before being dismissed for 74 when he nicked one to wicket-keeper Mark Boucher off Shaun Pollock.
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Chris Cairns and Chris Read quickly followed as the run-rate slowed in the middle overs, with Voges pulling Du Plessis to the waiting Flintoff at deep mid-wicket, leaving Mark Ealham to hit two sixes in a late cameo of 28 off 21 balls.
The home team had resumed in the morning on 218-5 and added a further 103 runs, thanks largely to the superb sixth-wicket partnership between Prince and Mark Boucher.
Ponting fell soon after, while Cameron White (30) threatened a lower-order renaissance alongside Hopes before the hard-hitting Victorian edged Steyn to De Villiers, who was keeping wicket in place of the injured Mark Boucher.
Amin and fellow left-hander Fawad Alam shared an enterprising 141 for the second-wicket, which ended shortly before lunch when Amin pulled a Mark Lawson top-spinner and got a top-edge to mid-wicket.
Earlier, Notts were finally bowled out for 532 from an overnight 420-5, Swann enjoying himself with 82 off 88 balls and putting on 72 with Mark Ealham for the eighth wicket.
The tourists' innings came to an end as Peter Siddle claimed his first wicket on Australian soil with the dismissal of Mark Boucher for 26.
Anderson's day did not begin auspiciously, however, as he dropped a regulation catch at slip to deny fellow England star Andrew Flintoff a fourth wicket when he found the edge of night-watchman Mark Davies's bat.
He bowled Mark Boucher, had AB de Villiers caught by wicket-keeper Brendon McCullum sprinting back to the boundary, and Paul Harris then went slashing behind.
Together the pair stretched their seventh wicket partnership to 93 before Blakey was dismissed by part-time off-spinner Mark Wagh.
And although Mark Stoneman departed just before the close for 44 following a second-wicket stand with Smith (21 not out) worth 68, it was very much Durham's day.
In helpful conditions for the bowlers, Chanderpaul arrived at the crease after Lancashire had lost Tom Smith to a catch at the wicket and Paul Horton to another at second slip off Balcombe - and immediately saw Mark Chilton edge behind.
Mark Ramprakash put his England disappointment behind him to lead Surrey to a three-wicket victory over Lancashire at The Oval.
Flintoff put Lancashire in an even stronger position late in the day when removing Mark Stoneman, Kyle Coetzer and England colleague Paul Collingwood, all caught behind by wicket-keeper Luke Sutton.
Rayner also collected the scalp of Surrey skipper Mark Butcher, who was caught behind pushing forward, having added 58 for the third wicket with Ramprakash.
The fifth-wicket partnership was worth 67 in 15.3 overs before Steve Harmison found Agarkar's edge, Mark Butcher taking a good diving catch at third man.
Maynard built on the good work done by Mark Cosgrove (50) and Jim Allenby (40), who shared 86 for the first wicket.
The game looked to be heading for a draw after Malan and Ben Scott (44) added 99 for the sixth wicket, until, soon after the lunch break, acting Middlesex skipper Eoin Morgan struck a deal with Essex counterpart Mark Pettini.
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